Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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kmer_top_n
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![]() Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
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kmer_ref_compare_wnode
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![]() Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47 |
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Downsample and HaplotypeCaller
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![]() Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
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Gene expression merge - combines RPKM gene expression from several experiments
Gene expression merge - combines RPKM gene expression from several experiments =================================================================================== Workflows merges RPKM gene expression from several experiments based on the values from GeneId, Chrom, TxStart, TxEnd and Strand columns. Reported RPKM columns are renamed based on the experiments names. |
![]() Path: workflows/feature-merge.cwl Branch/Commit ID: e0a30aa1ad516dd2ec0e9ce006428964b840daf4 |
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Detect Variants workflow for WGS pipeline
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![]() Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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![]() Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 5463361069e263ad6455858e054c1337b1d9e752 |
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chksum_seqval_wf_paired_fq.cwl
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![]() Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: f63e0781e85d2efc0ae8900548e858813da0b53b |
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bact_get_kmer_reference
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![]() Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47 |
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step-valuefrom-wf.cwl
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![]() Path: tests/step-valuefrom-wf.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df |
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scatter-wf1.cwl
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![]() Path: v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c |