Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
|
|
|
io-int-default-tool-and-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-int-default-tool-and-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
|
|
|
Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
|
|
|
format_rrnas_from_seq_entry
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 41dfc42a730087189122a2f74b2f547a4665a225 |
|
|
|
Transcripts annotation workflow
|
https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: c9c8f352e19ad7043bd242f6f6df2829b93e0a6f |
|
|
|
Filter single sample sv vcf from paired read callers(Manta/Smoove)
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
|
|
|
WGS QC workflow mouse
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs_mouse.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
|
|
|
align_sort_sa
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 41dfc42a730087189122a2f74b2f547a4665a225 |
|
|
|
io-union-input-default-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-union-input-default-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
|
|
|
scatter GATK HaplotypeCaller over intervals
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
