Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph star-stringtie_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-stringtie/paired_end/star-stringtie_wf_pe.cwl

Branch/Commit ID: a7594ee9c8b969c8f39a166753372d31ee68edcf
workflow graph etl.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/etl.cwl

Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: 0d0ba0c3410e8aee55c82f077cee31d8ee929b5a
workflow graph 02-peakcall.cwl

DNase-seq 02 quantification

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/DNase-seq_pipeline/02-peakcall.cwl

Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
workflow graph hello_world.cwl

https://github.com/dockstore/hello_world.git

Path: hello_world.cwl

Branch/Commit ID: 672acbfe4fcd5472c7a6294444bc3c52bfc44c42
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: f5c11df465aaadf712c38ba4933679fe1cbe03ca
workflow graph 02-trim-pe.cwl

RNA-seq 02 trimming - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
workflow graph env-wf3.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl

Branch/Commit ID: f207d168f4e7eb4dd2279840d4062ba75d9c79c3
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117
workflow graph 01-qc-pe.cwl

ChIP-seq 01 QC - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-pe.cwl

Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978