Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa
	kf-cram2gvcf-custom.cwl	https://github.com/cr-ste-justine/chujs-alignment-workflow.git Path: workflows/kf-cram2gvcf-custom.cwl Branch/Commit ID: c8255e2aab840f671d9f142d74f915c76415ff51
	CRAM_md5sum_checker_wrapper.cwl This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results	https://github.com/DataBiosphere/toolbox.git Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 540471878f913d672103e277180e3028c16a3027
	preprocess.cwl	https://github.com/epigenomics-screw/screw.git Path: cwl/preprocess.cwl Branch/Commit ID: 84cc7c986b15a4f46f67a6b4a2b2b8a7faa31bdb
	joint genotyping for trios or small cohorts	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/joint_genotype.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	Transcripts annotation workflow	https://github.com/mscheremetjew/workflow-is-cwl.git Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: 0be3513056e3ebbf7eac38bc1f066d846414bd6d
	test-extract_ifie.cwl	https://github.com/kyusque/abmp_log_dump2pieda.git Path: test-extract_ifie.cwl Branch/Commit ID: a14639e46149b1a248731c3d339f037c413940a8
	unix_align_workflow.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: tools/unix/unix_align_workflow.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 7c8eb4d23c3c9859f57421643710c0b6d57b606c