Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc |
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Variant calling workflow for given interval
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https://github.com/arvados/arvados-tutorial.git
Path: WGS-processing/cwl/helper/gatk-wf-with-interval.cwl Branch/Commit ID: c1a36dfcadbbdc8fc3b7c7732cb2dff895a4e8ee |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 22fce2dbdada0c4135b6f0677f78535cf980cb07 |
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alignment_prep.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |
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Detect Variants workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6 |
