Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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pcr-bottleneck-coef.cwl
ChIP-seq - map - PCR Bottleneck Coefficients |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/pcr-bottleneck-coef.cwl Branch/Commit ID: v1.0 |
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wf_fastqc.cwl
This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol) |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_fastqc.cwl Branch/Commit ID: master |
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test_workflow.cwl
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https://github.com/mightqxc/panda-atm.git
Path: test_workflow.cwl Branch/Commit ID: master |
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wgs alignment and germline variant detection
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: No_filters_detect_variants |
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WF6101.cwl
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https://github.com/Marco-Salvi/dtc61.git
Path: WF6101.cwl Branch/Commit ID: manuela |
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abra_workflow.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/ABRA/abra_workflow.cwl Branch/Commit ID: 0.0.33_dmp |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: 1.0.0 |
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cmsearch-multimodel.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: f993cad |
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mutations.cwl
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https://github.com/bioexcel/biobb_wf_mutations.git
Path: biobb_wf_mutations/cwl/mutations.cwl Branch/Commit ID: master |
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pipeline.cwl
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https://github.com/hubmapconsortium/azimuth-annotate.git
Path: pipeline.cwl Branch/Commit ID: 2e4017d |
