Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 3a287b7cb6162cdea79865235d224fea45963d87 |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_download/workflow.cwl Branch/Commit ID: 45bb8fc5cc5e5fee3f29099469621a53d084757d |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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phase VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4 |
