Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0
	umi molecular alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/umi_molecular_alignment.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: e9cc6de8cd1e00345969c646e5e6f27d7d10420f
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	varscan somatic workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0
	rnaseq-alignment-quantification This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: 3b9736a19eed3efc8f6cc587df282aad4f50a2ee