Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Whole Exome Sequencing
Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: fa86fce |
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rnaseq-pe.cwl
Runs RNA-Seq BioWardrobe basic analysis with pair-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-pe.cwl Branch/Commit ID: master |
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count-lines8-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines8-wf.cwl Branch/Commit ID: master |
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Transcriptome assembly workflow
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https://github.com/stain/workflow-is-cwl.git
Path: workflows/TranscriptomeAssembly-wf.cwl Branch/Commit ID: avoid-spaces |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: v1.0.0 |
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main-wes_chr21_test.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: wes-agha-test/wes_chr21_test-workflow-arvados/main-wes_chr21_test.cwl Branch/Commit ID: master |
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methylCtools_align_merge_sort_dedup.cwl
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https://github.com/ifishlin/Benchmarking_CWL.git
Path: workflows/methylCtools/tools/methylCtools_align_merge_sort_dedup.cwl Branch/Commit ID: main |
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chksum_for_corrupted_fastq_files.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_corrupted_fastq_files.cwl Branch/Commit ID: 0.5.0 |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: ca6ca613 |
