Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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report-wf.cwl
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![]() Path: WGS-processing/cwl/helper/report-wf.cwl Branch/Commit ID: 36de0d12e1cc88d0fd7d6b401df6c6e403f8c809 |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
![]() Path: workflows/rna-selector.cwl Branch/Commit ID: 25129f55226dee595ef941edc24d3c44414e0523 |
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kfdrc_bam_to_gvcf.cwl
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![]() Path: subworkflows/kfdrc_bam_to_gvcf.cwl Branch/Commit ID: 105340db0e99918fd7e8a8e14f1cde3022b44653 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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![]() Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 47ccbd0bc7b45bf8b3c92d0a66c1a9a232367a5d |
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umi duplex alignment fastq workflow
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![]() Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a |
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wgs alignment and tumor-only variant detection
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![]() Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788 |
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exome alignment and germline variant detection
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![]() Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d |
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phase VCF
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![]() Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b |
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scatter-wf1.cwl
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![]() Path: v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: ca8e6661b5cab1f017e5bc4024650722dae4d50b |
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bam to trimmed fastqs and HISAT alignments
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![]() Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd |