Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f
	wgs alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	gk-run-siesta-snapshot.cwl	https://github.com/vdikan/cwl-gk-thermal.git Path: cwl/gk-run-siesta-snapshot.cwl Branch/Commit ID: 48f4b8266a5a199cfc100d45148996f10a092f3b
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_nonhuman.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	taxonomy_check_16S	https://github.com/ncbi/pgap.git Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 61eaea2f746c8a1fc2a2b731056b068e28ca4e20
	bam_filtering BAM filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 5230874e81911b6591cf859fe794f71f4eb8bb97
	salmon_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/salmon/paired_end/salmon_wf_pe.cwl Branch/Commit ID: 14c76e15665ef0566eae5c2be75dba7feb74a50b
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 61eaea2f746c8a1fc2a2b731056b068e28ca4e20
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	hisat2-cufflinks_wf_se.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/hisat2-cufflinks/single_end/hisat2-cufflinks_wf_se.cwl Branch/Commit ID: 14c76e15665ef0566eae5c2be75dba7feb74a50b