Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph extract_readgroups_bam_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl

Branch/Commit ID: 10c05314890db2b5bd85c3d338d7f5657fe0c646
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph simple_two_step.cwl

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_two_step.cwl

Branch/Commit ID: b262193a657b49fc4ac93329d51005b6917ce58b
workflow graph exome alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome_alignment.cwl

Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
workflow graph Align reference proteins plane complete workflow

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_protein_alignment.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: 87799c713ed7aa7b41c2f1b367825d509e47fbd2
workflow graph cwlsite.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/site/cwlsite.cwl

Branch/Commit ID: 6e9f82a6d2195d4f16f28fd6e1485138372fb430
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
workflow graph exome alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome_alignment.cwl

Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03