Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: e0fb04a0d8bc648183c6b71d099ce7aea3c3b3ff
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 94c97cfc95a5bf102a6f9206e045ea1afb768317
	rnaseq-kallisto-pe.cwl	https://github.com/pitagora-network/DAT2-cwl.git Path: workflow/RNA-seq/rnaseq-kallisto-pe/rnaseq-kallisto-pe.cwl Branch/Commit ID: 9e476f3090972138a0c701eb1b251e0237837ecc
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f
	concat.cwl	https://github.com/mskcc/pluto-cwl.git Path: cwl/concat.cwl Branch/Commit ID: c10d8bcf045067b3510bff68e2e957fccea0d7ea
	joint genotyping for trios or small cohorts	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/joint_genotype.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_mem.cwl Branch/Commit ID: 27011e882ea07bfcac23faec299341ec6215312b
	cnv_exomedepth CNV ExomeDepth calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 27011e882ea07bfcac23faec299341ec6215312b