Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Chipseq alignment for nonhuman with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq_alignment_nonhuman.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/final_filtering.cwl Branch/Commit ID: 5230874e81911b6591cf859fe794f71f4eb8bb97 |
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lobSTR-workflow.cwl
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https://github.com/common-workflow-language/cwlviewer.git
Path: src/test/resources/cwl/lobstr-v1/lobSTR-workflow.cwl Branch/Commit ID: ba23c47595c7a91dac9e523a1a311077020f73a6 |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f |
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umi molecular alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_umi_molecular.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
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wgs alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
