Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Alignment without BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
|
|
|
Detect Variants workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
|
|
|
qc-assembled.workflow.cwl
|
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/qc-assembled.workflow.cwl Branch/Commit ID: 9aba38fd1569287b7256ace7163ac84320909f8a |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
|
|
|
exome alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
|
|
|
Protein_Inference_workflow.cwl
|
https://github.com/adamscharlotte/CWL-workflow.git
Path: Protein_Inference_workflow.cwl Branch/Commit ID: af5d00cd0e43fdf914714056a499edf2d61454d4 |
|
|
|
etl.cwl
|
https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/checkout_workflow/etl.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
|
|
|
Subworkflow to allow calling cnvkit with cram instead of bam files
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
|
|
|
fastqtosam_se.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_se.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
