Explore Workflows

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Graph	Name	Retrieved From	View
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: f248ac3ccbf6840af721251c7e9451abd9b2c09f
	hello_world.cwl	https://github.com/abessiari/hello_world.git Path: hello_world.cwl Branch/Commit ID: 2e0e67dc9f6472fabad7e0b65aec633a6929e3ce
	trimmed_fastq Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: f248ac3ccbf6840af721251c7e9451abd9b2c09f
	blastp_wnode_struct	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: 992f84a959e1776acf3be77d2ca15fe11fa8673d
	bam_filtering BAM filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: f248ac3ccbf6840af721251c7e9451abd9b2c09f
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: 5cc8306ce84c027db4c092077983294557213136
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 369afa7090a7480e6a0b144eff967a4a52b6fde2
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f