Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_index.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	samtools_view_sam2bam	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	cnv_codex CNV CODEX2 calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_codex.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	Seed Protein Alignments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	SPRM pipeline	https://github.com/hubmapconsortium/sprm.git Path: pipeline.cwl Branch/Commit ID: 8f54af139bc3f5229790ff26512e69626e5c41e6
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46
	final_filtering Final filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/final_filtering.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46