Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi duplex alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
	BLASTP, parse, dump FASTA	https://github.com/ncbi/cwl-demos.git Path: blast-pipelines/simple_three_step.cwl Branch/Commit ID: 8c1da0a9846a9c06e19461dc05854260bfbb0d84
	fastqtosam_se.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_se.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115
	Per-chromosome pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
	varscan somatic workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115
	extract_readgroups_bam.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
	env-wf3.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2