Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph methylCtools_index.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/methylCtools/tools/methylCtools_index.cwl

Branch/Commit ID: main
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: downsample_and_recall
workflow graph 02-trim-pe.cwl

ChIP-seq 02 trimming - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: master
workflow graph giab_haplotypecaller.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/giab_haplotypecaller.cwl

Branch/Commit ID: master
workflow graph aggregate_visualize

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: aggregate_visualize.cwl
workflow graph chksum_seqval_wf_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: 0.2.0
workflow graph varscan somatic workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/varscan.cwl

Branch/Commit ID: low-vaf
workflow graph read_preprocessing.cwl

https://github.com/nigyta/rice_reseq.git

Path: workflows/read_preprocessing.cwl

Branch/Commit ID: master
workflow graph waltz_workflow_all_bams.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/waltz/waltz_workflow_all_bams.cwl

Branch/Commit ID: master
workflow graph exome alignment and germline variant detection

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: No_filters_detect_variants