Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 0fa87c018a21d55cdea6e89be1feec1913144009
workflow graph integrity.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/integrity.cwl

Branch/Commit ID: 53fd4d4c05891c7c8b5cd6a5a8179a08c2e585c9
workflow graph presto.cwl

https://github.com/EOSC-LOFAR/presto-cwl.git

Path: presto.cwl

Branch/Commit ID: c00bd3fa1740fa94e33e9eb996eceb67447e1df0
workflow graph Assign Clade plane complete workflow

https://github.com/ncbi-gpipe/pgap.git

Path: clade_assign/wf_clade_assign.cwl

Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 9a72f76a5c8c874278205fcdeb93362a0d8a5152
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 712de5a25d08e359f831f60d1aedd0f3fd1ca32d
workflow graph extract_gencoll_ids

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: 96247811db2c862fd520f9b8d946406c2f49a710
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 5dc7c5ca618a248a99bd4bf5f3042cdb21947193
workflow graph extract_readgroup_fastq_se_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl

Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216