Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: ad42ab7a8c7e190d5f8615b52278346262256424
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: fa86fce570ab91c624272c8ffda672069d2f276d
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 88c5eef2f5ee5c1e878b0476f6e1f74cecf9ec29
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: 47d6375df6c6e4486e03d964b3abf1d71943e609
workflow graph prefactor.cwl

https://github.com/gijzelaerr/prefactor-cwl.git

Path: prefactor.cwl

Branch/Commit ID: 132d1f48cd7cef2a0f2c42be3a78e96b622e1b8f
workflow graph cram_to_bam workflow

https://github.com/MarkRobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: 0ae2468ab2ba0b9a196c2aa89b580555750bf0f6

Packed ID: workflow.cwl
workflow graph runner.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/runner.cwl

Branch/Commit ID: 53fd4d4c05891c7c8b5cd6a5a8179a08c2e585c9
workflow graph workflow.cwl

https://github.com/mr-c/scalability-reproducibility-chapter.git

Path: CWL/workflow.cwl

Branch/Commit ID: 3aa8e72bfba7f4cbe455b59298de3158986fab97
workflow graph pindel parallel workflow

https://github.com/genome/arvados_trial.git

Path: pindel/workflow.cwl

Branch/Commit ID: 202b43b7449485a317c857d62ca7d39196764e65