Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 4b2af54 |
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EMG pipeline v3.0 (single end version)
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: 5833078 |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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bams2gvcf.wBQSR.multisamples.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.wBQSR.multisamples.cwl Branch/Commit ID: master |
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wrapped_workflow_example_workflow.cwl
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https://github.com/Aeolic/example-workflow.git
Path: wrapped_workflow_example_workflow.cwl Branch/Commit ID: main |
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Conversion and compression of RDF files
Workflow to convert a RDF file to the HDT format and GZIP compress it for long term storage |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_toHDT_compression.cwl Branch/Commit ID: master |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/step-valuefrom2-wf.cwl Branch/Commit ID: main |
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birds.cwl
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https://github.com/EOSC-LOFAR/presto-cwl.git
Path: birds.cwl Branch/Commit ID: master |
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cnv_manta
CNV Manta calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl Branch/Commit ID: 1.0.6 |
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Detect Variants workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/detect_variants_nonhuman.cwl Branch/Commit ID: low-vaf |
