Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1cfe5c41d640b85866f484933b8f9bb4c175796f
workflow graph workflow.cwl

https://github.com/gijzelaerr/prefactor-cwl.git

Path: workflow.cwl

Branch/Commit ID: a36492d9de1ea4f81a10d34b848f0ee2ca2cc647
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b
workflow graph dna.cwl#main

https://github.com/common-workflow-language/workflows.git

Path: workflows/make-to-cwl/dna.cwl

Branch/Commit ID: 06ecc1237ed6baee8ba9bc0f3fd04dca4b8fc2bf

Packed ID: main
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: ca6ca613f0d3728d9589a6ca6293e66dfde87bfb
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: fa86fce570ab91c624272c8ffda672069d2f276d
workflow graph oxog_varbam_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: 1cfe5c41d640b85866f484933b8f9bb4c175796f
workflow graph pack.cwl

create textures and pack them to be a stellaris mod

 https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: pack.cwl

Branch/Commit ID: 75220fd16cb31b7424b554489cca7921777be4f3
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 712de5a25d08e359f831f60d1aedd0f3fd1ca32d