Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305 |
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FASTQ to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71 |
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Align reference proteins plane complete workflow
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2 |
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kmer_cache_store
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6 |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 94c97cfc95a5bf102a6f9206e045ea1afb768317 |
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kfdrc-jointgenotyping-refinement-workflow.cwl
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https://github.com/kids-first/kf-jointgenotyping-workflow.git
Path: workflow/kfdrc-jointgenotyping-refinement-workflow.cwl Branch/Commit ID: 3fc9fa02641233d3bf6e33b2649e977b2baa461b |
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sequence (bam or fastqs) to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_trimmed_fastq.cwl Branch/Commit ID: b8000c793d6e7ce4d690406c4f914c5c62acd51f |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2 |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: ecac0fda44df3a8f25ddfbb3e7a023fcbe4cbd0f |
