Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines9-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 26c8b9ca0ffd37c5f76a46a36315f6fd944833fe |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f |
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module-5
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-5.cwl Branch/Commit ID: 4e0f50f76ff0dfc9c5d9b4a92e4f4ba0fdc9f402 |
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hisat2-cufflinks_wf_pe.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/hisat2-cufflinks/paired_end/hisat2-cufflinks_wf_pe.cwl Branch/Commit ID: d20bf7da10148ffd0166bdaf1ec87a8570f7c1a4 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1 |
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biowardrobe_chipseq_se.cwl
The workflow is used to run CHIP-Seq basic analysis with single-end input FASTQ file. In outputs it returns coordinate sorted BAM file alongside with index BAI file, quality statistics of the input FASTQ file, reads coverage in a form of bigWig file, peaks calling data in a form of narrowPeak or broadPeak files. |
https://github.com/Barski-lab/ga4gh_challenge.git
Path: biowardrobe_chipseq_se.cwl Branch/Commit ID: 24c7e3ca12f85415c41cec56595954043dd69c44 |
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integrity.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |
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module-5
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-5.cwl Branch/Commit ID: 5b6fb984f3cf8e971d677c92a096cd437f34b787 |
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module-6
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-6.cwl Branch/Commit ID: 5b6fb984f3cf8e971d677c92a096cd437f34b787 |
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module-1-2-chunk
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-1-2.chunk.cwl Branch/Commit ID: 5b6fb984f3cf8e971d677c92a096cd437f34b787 |
