Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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readgroup_fastq_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |
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bwa_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |
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xenbase-sra-to-fastq-pe.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-sra-to-fastq-pe.cwl Branch/Commit ID: e433136aecc9447bce63ad1363a67a8a356fd13c |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 52b2b411e6791506d86cf9631538c8e2b3bbb52c |
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extract_readgroup_fastq_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92 |
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count-lines10-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines10-wf.cwl Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa |
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format-maf
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: b5ce620cd29416412181929a83695286786c4e7b |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: fb4b118ff21f3cad2ad8953f95d557cc09783e6b |
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xenbase-rnaseq-pe.cwl
XenBase workflow for analysing RNA-Seq paired-end data |
https://github.com/datirium/workflows.git
Path: workflows/xenbase-rnaseq-pe.cwl Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847 |
