Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fastqtosam_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/fastqtosam/fastqtosam_se.cwl

Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3
workflow graph module-1-scatter-chunk

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.scatter.chunk.cwl

Branch/Commit ID: 4e0f50f76ff0dfc9c5d9b4a92e4f4ba0fdc9f402
workflow graph nestedworkflows.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/examples/nestedworkflows.cwl

Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2
workflow graph integrity.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/integrity.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
workflow graph extract_amplicon_kit.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_amplicon_kit.cwl

Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
workflow graph extract_amplicon_kit_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl

Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
workflow graph index sim seq

create sorted / filtered similarity file with feature sequences, and index by md5

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/index_sim_seq.workflow.cwl

Branch/Commit ID: 8a5ded15fad8ee1a4315aef1fdc1d53cdcdc12b8
workflow graph Prepare user input

Prepare user input for NCBI-PGAP pipeline

 https://github.com/ncbi/pgap.git

Path: prepare_user_input2.cwl

Branch/Commit ID: 0d0ba0c3410e8aee55c82f077cee31d8ee929b5a
workflow graph exome_metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/exome_metrics.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd