Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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ani_top_n
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https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
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tt_kmer_top_n.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
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bacterial_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/bacterial_screening.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
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download_quality_control.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/sra/download_quality_control.cwl Branch/Commit ID: 92c23571bd5925c3d33678bc944a8546597cf3a3 |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/datirium/workflows.git
Path: subworkflows/heatmap-prepare.cwl Branch/Commit ID: a9551ece898f619167db58e4b74a6cae2d7f7d13 |
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revsort-array.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/Duke-GCB/calrissian.git
Path: input-data/revsort-array.cwl Branch/Commit ID: 68362997c0f3d73dc753f08696148d1c5de70017 |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1 |
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MEME motif
This workflow uses MEME suite for motif finding |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/meme-motif.cwl Branch/Commit ID: 92c23571bd5925c3d33678bc944a8546597cf3a3 |
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transform_pack.cwl#bwa_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/transform_pack.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b Packed ID: bwa_se.cwl |
