Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Protein Ligand Complex MD Setup tutorial using BioExcel Building Blocks (biobb)

Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI).

https://github.com/bioexcel/biobb-wf-md-setup-protein-cwl.git

Path: protein_md.cwl

Branch/Commit ID: master
workflow graph ST520106.cwl

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520106.cwl

Branch/Commit ID: main
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: master
workflow graph cmsearch-multimodel.cwl

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: master
workflow graph test-workflow.cwl

https://github.com/pjotrp/CWL-workflows.git

Path: Workflows/test-workflow.cwl

Branch/Commit ID: master
workflow graph CLE gold vcf evaluation workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/vcf_eval_cle_gold.cwl

Branch/Commit ID: low-vaf
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 708fd97
workflow graph gatk-4.0.0.0-haplotypecaller.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/gatk-4.0.0.0-haplotypecaller.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: fa86fce
workflow graph assm_assm_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_assm_assm_blastn_wnode.cwl

Branch/Commit ID: dev