Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph conditional_bamindex.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/conditional_bamindex.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph fp_filter workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: fp_filter/workflow.cwl

Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66
workflow graph preprocess.cwl

https://github.com/NCBI-Hackathons/Epigenomics_CWL.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: 934baaadf133eda785426079d98489307d02f3d7
workflow graph rnaediting2strands.workflow.cwl

https://github.com/YeoLab/sailor.git

Path: CWL-SINGULARITY-pipeline-building-code/cwl/rnaediting2strands.workflow.cwl

Branch/Commit ID: 9a57b4b7a62cea9149d99ec3b186dec26cfc315b
workflow graph bwa_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph process VCF workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: strelka/process_vcf.cwl

Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66
workflow graph conditional_markduplicates.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/conditional_markduplicates.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
workflow graph varscan somatic workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/varscan.cwl

Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66