Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
scRNA-seq pipeline using Salmon and Alevin
|
Path: pipeline.cwl Branch/Commit ID: release |
|
|
|
811-12.cwl
|
Path: tests/wf/811-12.cwl Branch/Commit ID: 6b1b15c0c54846d8e765893f0931b97410263e10 |
|
|
|
pipeline-bam2vcf-distr.cwl
DNAseq pipeline from bam to vcf in distributed mode |
Path: pipeline/pipeline-bam2vcf-distr.cwl Branch/Commit ID: master |
|
|
|
RSeQC workflow or single-end samples
This workflow runs the RSeQC quality control workflow |
Path: workflows/RSeQC/rseqc-bam-qc-SE.cwl Branch/Commit ID: master |
|
|
|
SAMSA2 pipeline
SAMSA2 complete workflow for meta-omics read annotation Steps: - Diamond read blastx - Refseq - SEED - SAMSA2 processing |
Path: cwl/workflows/workflow_samsa2.cwl Branch/Commit ID: master |
|
|
|
rnaseq-alignment-circRNA-multiple-samples
This workflow aligns multiple samples using STAR for paired-end samples to be used in circRNA pipeline |
Path: workflows/Alignments/star-alignment-circRNA-multiple-samples-default.cwl Branch/Commit ID: master |
|
|
|
nestedworkflows.cwl
|
Path: v1.0/examples/nestedworkflows.cwl Branch/Commit ID: main |
|
|
|
spurious_annot
|
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: test |
|
|
|
mut2.cwl
|
Path: tests/wf/mut2.cwl Branch/Commit ID: main |
|
|
|
env-wf1.cwl
|
Path: tests/env-wf1.cwl Branch/Commit ID: main |
