Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Create Genomic Collection for Bacterial Pipeline	https://github.com/ncbi-gpipe/pgap.git Path: genomic_source/wf_genomic_source.cwl Branch/Commit ID: df5e285d48cbdf2e296d530a3067d41b1905e13a
	wf-variantcall.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-variantcall.cwl Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
	status_postgres.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/dnaseq/status_postgres.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0
	Align reference proteins plane complete workflow	https://github.com/ncbi-gpipe/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: df5e285d48cbdf2e296d530a3067d41b1905e13a
	EMG core analysis	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: workflows/emg-core-analysis-v4.cwl Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
	kmer_build_tree	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
	etl.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/etl.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0
	zip_and_index_vcf.cwl This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: zip_and_index_vcf.cwl Branch/Commit ID: ad42ab7a8c7e190d5f8615b52278346262256424
	spurious_annot pass2	https://github.com/ncbi-gpipe/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: df5e285d48cbdf2e296d530a3067d41b1905e13a