Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph chip_qc.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflow_modules/chip_qc.cwl

Branch/Commit ID: 9ba07c9e24e49cd9cb21e6544d73b3f04316cf6f
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome.cwl

Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
workflow graph BLAST against rRNA db

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_blastn.cwl

Branch/Commit ID: 8a8fffb78b1e327ba0da51840ac8acc0c218d611
workflow graph gatk4_cohort_genotyping.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/gatk4_cohort_genotyping.cwl

Branch/Commit ID: d777030ca3654fe78462ee69adcbd8221303b006
workflow graph freebayes.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/freebayes.cwl

Branch/Commit ID: d777030ca3654fe78462ee69adcbd8221303b006
workflow graph mirna_profiling.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/mirna_profiling.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
workflow graph star_samtools_featurecounts_edger.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_featurecounts_edger.cwl

Branch/Commit ID: 33a3cdba1184ad14e7a168eef3c505b9b4332f47
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f
workflow graph merge and annotate svs with population allele freq

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/merge_svs.cwl

Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f
workflow graph basename-fields-test.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/basename-fields-test.cwl

Branch/Commit ID: 8c35118bbcd2b125635dcdfb16a09e09bbfd4015