Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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integrity.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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metrics.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/metrics.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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readgroup_fastq_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_se.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023 |
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Short read alignment pipeline
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https://github.com/mruffalo/chromvar-cwl.git
Path: alignment-pipeline.cwl Branch/Commit ID: a1bd61e9b4000cbc12e36f686e9ffe0e5e8fe348 |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/datirium/workflows.git
Path: subworkflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: 2768d117212e50859edebea74b0641dfaf4feba4 |
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metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/metrics.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 7f857f7f2d7c080d27c775b67a6d6f7d94bce31f |
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xenbase-sra-to-fastq-se.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 6e09b4bf1ff0eb3dd1294f5578624c5a2a2b0b37 |
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pipeline-fastq2vcf-distr.cwl
DNAseq pipeline from fastq to vcf in distributed mode |
https://github.com/Sentieon/Sentieon-cwl.git
Path: pipeline/pipeline-fastq2vcf-distr.cwl Branch/Commit ID: d20382adfe7285cb517a25d95d2bcb7586546e23 |
