Explore Workflows
View already parsed workflows here or click here to add your own
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
Path: workflows/super-enhancer.cwl Branch/Commit ID: 6e09b4bf1ff0eb3dd1294f5578624c5a2a2b0b37 |
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schemadef-wf.cwl
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Path: v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2 |
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exome alignment and somatic variant detection
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Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2 |
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extract_readgroup_fastq_se.cwl
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Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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count-lines12-wf.cwl
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Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a |
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Transcriptome assembly workflow (paired-end version)
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Path: workflows/TranscriptomeAssembly-wf.paired-end.cwl Branch/Commit ID: 11cba46ea263315d4d66e86819718fa157e927b1 |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
Path: wf_common.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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readgroup_fastq_pe.cwl
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Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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conflict-wf.cwl#collision
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Path: v1.0/v1.0/conflict-wf.cwl Branch/Commit ID: 8c35118bbcd2b125635dcdfb16a09e09bbfd4015 Packed ID: collision |
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count-lines1-wf.cwl
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Path: v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 8c35118bbcd2b125635dcdfb16a09e09bbfd4015 |
