Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90 |
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functional analysis prediction with InterProScan
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/functional_analysis.cwl Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90 |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90 |
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metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/metrics.cwl Branch/Commit ID: 23819c2a0dcd98b61487cbc82e602dd58cb4d342 |
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tRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616 |
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EMG pipeline v3.0 (single end version)
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90 |
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CRAM_md5sum.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: CRAM-no-header-md5sum/md5sum/CRAM_md5sum.cwl Branch/Commit ID: e063603e80b382084def46f15f4ecb8968354346 |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616 |
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Trim and reformat reads (single and paired end version)
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 6d8d29a2156b93a75f1d1c6952738bd63f6bd98e |
