Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 7f857f7f2d7c080d27c775b67a6d6f7d94bce31f
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199
workflow graph realign-distr.cwl

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/realign-distr.cwl

Branch/Commit ID: d20382adfe7285cb517a25d95d2bcb7586546e23
workflow graph wgs alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/wgs_alignment.cwl

Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
workflow graph metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/metrics.cwl

Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199
workflow graph metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/metrics.cwl

Branch/Commit ID: dd7f86b3cc10eb1cda07dc2fc279ba2529c8ad61
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
workflow graph BLASTP, parse, dump FASTA

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_three_step.cwl

Branch/Commit ID: 8c1da0a9846a9c06e19461dc05854260bfbb0d84