Explore Workflows

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/wgs_alignment.cwl

Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5

Reverse the lines in a document, then sort those lines.

https://github.com/Duke-GCB/calrissian.git

Path: input-data/revsort-single.cwl

Branch/Commit ID: ecd9da2db4dcda1737edde181ab2c60fd96a7ff4

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-5.cwl

Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl

Branch/Commit ID: 06a44bea01af4dedded36bd422260574c7b28c9b

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/fastq_readgroup_stats/etl.cwl

Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: e4d6182d5f7a6a880e5f2b21273cf40d25e187df

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-valuefrom-wf6.cwl

Branch/Commit ID: a5ae5ad0c9017ed625fb372f65e72dbb069439b0

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e