Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: f6b5196
workflow graph wf-loadContents3.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents3.cwl

Branch/Commit ID: main
workflow graph mini-ST610106.cwl

https://github.com/Marco-Salvi/dtc61.git

Path: mini-ST610106.cwl

Branch/Commit ID: manuela
workflow graph realignment.cwl

https://github.com/mskcc/roslin-cwl.git

Path: modules/pair/realignment.cwl

Branch/Commit ID: master
workflow graph fp_filter workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/fp_filter.cwl

Branch/Commit ID: downsample_and_recall
workflow graph varscan somatic workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/varscan.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: ca6ca613
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 5e82174
workflow graph oxog_varbam_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/david4096/OxoG-Dockstore-Tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: develop
workflow graph bqsr-flow.cwl

Run BQSR pre+post+plot flow

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/bqsr-flow.cwl

Branch/Commit ID: master