Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph structural-variants-pair.cwl

https://github.com/mskcc/argos-cwl.git

Path: modules/pair/structural-variants-pair.cwl

Branch/Commit ID: eb1c641d3134e7e13bc1a15fe7d8de7937527aca
workflow graph revsort_step_bad_schema.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort_step_bad_schema.cwl

Branch/Commit ID: main
workflow graph bam2tasuke.cwl

https://github.com/nigyta/rice_reseq.git

Path: workflows/bam2tasuke.cwl

Branch/Commit ID: master
workflow graph Prepare user input

Prepare user input for NCBI-PGAP pipeline

 https://github.com/ncbi/pgap.git

Path: prepare_user_input2.cwl

Branch/Commit ID: dev
workflow graph predict-workflow.cwl

https://github.com/johnbradley/iMADS-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 3039744
workflow graph annotator_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: annotator_sub_wf.cwl

Branch/Commit ID: develop
workflow graph Dockstore.cwl

INTEGRATE workflow: untar, tophat align, samtools index, Integrate fusion

 https://github.com/Jeltje/integrate.git

Path: Dockstore.cwl

Branch/Commit ID: master
workflow graph cond-wf-009_nojs.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-009_nojs.cwl

Branch/Commit ID: main
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl

Branch/Commit ID: master