Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph gatk-4.0.0.0-joint-calling.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/gatk-4.0.0.0-joint-calling.cwl

Branch/Commit ID: master
workflow graph wf_rnaediting2strands.cwl

https://github.com/YeoLab/sailor.git

Path: cwl/wf_rnaediting2strands.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/Sage-Bionetworks-Challenges/Anti-PD1-DREAM-Infrastructure.git

Path: workflow.cwl

Branch/Commit ID: master
workflow graph pipeline-fastq2vcf-multisample.cwl

DNAseq pipeline from fastq to vcf for multiple samples

 https://github.com/Sentieon/Sentieon-cwl.git

Path: pipeline/pipeline-fastq2vcf-multisample.cwl

Branch/Commit ID: master
workflow graph rw-distr.cwl

run scatter-gather for rw stage

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/rw-distr.cwl

Branch/Commit ID: master
workflow graph A workflow that aligns a fasta file and provides statistics on the SAM file

A workflow that aligns a fasta file and provides statistics on the SAM file

 https://github.com/svonworl/multi-step-cwl.git

Path: version_1_2/sub_workflow_metrics.cwl

Branch/Commit ID: develop
workflow graph Genomes.cwl

This workflow describes the comparative genomics and genome assembly summary statistics

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: boa/Genomes.cwl

Branch/Commit ID: master
workflow graph Whole_Exome-Seq.cwl

https://github.com/athenarc/whole-exome-seq.git

Path: workflows/Whole_Exome-Seq.cwl

Branch/Commit ID: main
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: salmon_quant.cwl

Branch/Commit ID: 536d6ed
workflow graph mixed_library_metrics.cwl

https://github.com/denis-yuen/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/mixed_library_metrics.cwl

Branch/Commit ID: master