Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
	exomeseq-03-organizedirectories.cwl	https://github.com/Duke-GCB/bespin-cwl.git Path: subworkflows/exomeseq-03-organizedirectories.cwl Branch/Commit ID: e82f3a71183048dd6700ec6725ee526ac1a95238
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	Exome QC workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c