Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph fastqSE2bam.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/fastqSE2bam.cwl

Branch/Commit ID: 2862ec3c609561245267e5f32e7b94eb353e2d5b
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580
workflow graph etl_http.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/etl_http.cwl

Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c
workflow graph integrity.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/integrity.cwl

Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
workflow graph wf_demultiplex_pe.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_pe.cwl

Branch/Commit ID: 01c40305cd0adf60b245ba4c59d6607585ae6199
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f
workflow graph preprocess fasta

Remove reads from fasta files based on sequence stats. Return fasta files with reads passed and reads removed.

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/preprocess-fasta.workflow.cwl

Branch/Commit ID: 81feefc84ec0faecf1ade718001d5f07610e616e