Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph etl_http.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/etl_http.cwl

Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0
workflow graph metacal-wf.cwl

https://github.com/EiffL/metacal-pipeline.git

Path: tools/metacal-wf.cwl

Branch/Commit ID: f957c91eb041d0fd010cd983e0567a997698979e
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-single.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
workflow graph metacal-wf.cwl

https://github.com/EiffL/metacal-pipeline.git

Path: tools/metacal-wf.cwl

Branch/Commit ID: b5f3eaf27bfe135dbe009a05f36bf031fd227c81
workflow graph CRAM_md5sum.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/md5sum/CRAM_md5sum.cwl

Branch/Commit ID: b140a0bec7d0f875d83cca82744afcbd285eeeda
workflow graph databkgmc.cwl

https://github.com/lukasheinrich/cwltests.git

Path: cwl/databkgmc.cwl

Branch/Commit ID: ef8ad956cb030de00c949afce02e19c02d6d414c
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: b140a0bec7d0f875d83cca82744afcbd285eeeda
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
workflow graph Exome QC workflow

https://github.com/genome/arvados_trial.git

Path: qc/workflow_exome.cwl

Branch/Commit ID: 4cded2c595b2ff83046729cd230f5ad34be3137d