Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines9-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 8c35118bbcd2b125635dcdfb16a09e09bbfd4015
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
	haplotypecaller.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl Branch/Commit ID: d777030ca3654fe78462ee69adcbd8221303b006
	bams2gvcf.woBQSR.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/bams2gvcf.woBQSR.cwl Branch/Commit ID: 9064c301d858a796f8340d1e762e5916fd199da0
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: cec32f5b60c1d048257e3c3daed6912d5d2a054e
	PGAP Pipeline, simple user input, PGAPX-134 PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)	https://github.com/ncbi/pgap.git Path: pgap.cwl Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: cec32f5b60c1d048257e3c3daed6912d5d2a054e
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
	transform.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/validate/transform.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de