Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
bwa_pe.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_pe.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846 |
|
|
|
01-qc-pe.cwl
ATAC-seq 01 QC - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318 |
|
|
|
03-map-pe.cwl
ATAC-seq 03 mapping - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/03-map-pe.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318 |
|
|
|
Align reference proteins plane complete workflow
|
https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611 |
|
|
|
xenbase-sra-to-fastq-pe.cwl
|
https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-sra-to-fastq-pe.cwl Branch/Commit ID: 6bf56698c6fe6e781723dea32bc922b91ef49cf3 |
|
|
|
mixed_library_metrics.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
|
|
|
extract_readgroups_bam.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611 |
|
|
|
spurious_annot pass2
|
https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611 |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611 |
