Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 9c57dba558a4e04a1884eae1df8431dcaccafc1e
workflow graph rnaediting2strands.workflow.cwl

https://github.com/YeoLab/sailor.git

Path: CWL-SINGULARITY-pipeline-building-code/cwl/rnaediting2strands.workflow.cwl

Branch/Commit ID: 6f21086da3306534c81989aa64ce789712de3166
workflow graph collate_unique_rRNA_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_rRNA_headers.cwl

Branch/Commit ID: ef3c7b2638b3125ee9628d292d014e332cee83b0
workflow graph worldpopulation.cwl

https://github.com/reanahub/reana-demo-worldpopulation.git

Path: workflow/cwl/worldpopulation.cwl

Branch/Commit ID: a84f7a6fb913e2252f470562b4e7f633260d16a3
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: b38a8a4785746b8267913ea5389e21ae6dc921a3
workflow graph Unaligned to aligned BAM

https://github.com/genome/arvados_trial.git

Path: unaligned_bam_to_bqsr/align.cwl

Branch/Commit ID: 3e84098f77686523fe3dbb807b35450b56501c59
workflow graph Transcripts annotation workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: e9d078a5874dd5d545116113f5a830915ddd3e1d
workflow graph main-somatic.cwl

https://github.com/FarahZKhan/bcbio_test_cwl.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: 0eecb30ff25047ce354061993e96aaa84fd017d5
workflow graph demo_megahit_pipeline_paired.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: cwl/demo_megahit_pipeline_paired.cwl

Branch/Commit ID: cb4831bd42c668c39d2b01c626d9ec5636a579bb
workflow graph Tumor-Only Detect Variants workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: detect_variants/tumor_only_detect_variants.cwl

Branch/Commit ID: 6eb7d35ad46207f4ff49e84106b717e17331eb4b