Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316 |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7e3e1cb249e85285e27ef3ebd4104965f835241d |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0805e8e0d358136468e0a9f49e06005e41965adc |
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env-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383 |
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env-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: e835bc0487fe42fb330b6222c9be65d18dd81ec9 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba |
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functional-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/checker_wf/functional-wf.cwl Branch/Commit ID: e835bc0487fe42fb330b6222c9be65d18dd81ec9 |
