Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	haplotypecaller.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	download_prep.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/utils/download_prep.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	gatk3_realignment.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/realignment/gatk3_realignment.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	alignment_bwa_mem.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	wf_makeblastdb.cwl	https://github.com/ncbi/pipelines.git Path: amr_finder/wf_makeblastdb.cwl Branch/Commit ID: 85bd1acfc587e6a3ebce7ccf1ce93bf8b48e881c
	upload_results.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/utils/upload_results.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	pindel parallel workflow	https://github.com/genome/cancer-genomics-workflow.git Path: pindel/workflow.cwl Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537
	harmonization_bwa_mem.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem.cwl Branch/Commit ID: 1595f2bc453663c9e71c1a2d60729f481921029e
	bwa_se.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d
	kmer_compare_wnode	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f