Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	etl.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/etl.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	conditional_markduplicates.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: 20a901f44c9fb0e6f4ee3c40ec33fa4b1c8ef005
	extract_amplicon_kit.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_amplicon_kit.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	fastq_clean_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/fastq_clean_pe.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4
	format-maf	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: 45f7695e28fa2185944fd220834eeac2e27d53c7