Explore Workflows

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf

https://github.com/sevenbridges-openworkflows/Broad-Best-Practice-Data-pre-processing-CWL1.0-workflow.git

Path: broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 1af8809

Parallel InSAR coherence workflow: 1. Generate InSAR pairs from input date range and burst parameters 2. Process each pair in parallel (scatter) 2. STAC results (removed for now)

https://github.com/jzvolensky/s1-workflows.git

Path: cwl/sar_coherence_parallel_test.cwl

Branch/Commit ID: coherence_parallel_refactor

Packed ID: main

https://github.com/hubmapconsortium/hra-workflows.git

Path: download-models.cwl

Branch/Commit ID: 66df9a253dce61b8827cf75ab7eacd16786c0b41

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: f993cad

Decompress mate pair fastq files

https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/decompress_mate_pair.workflow.cwl

Branch/Commit ID: master

https://github.com/mskcc/argos-cwl.git

Path: workflows/sample-workflow.cwl

Branch/Commit ID: master

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: test

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: master