Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: f58bb8121e49a72cf7419a4a38c08f01b931dd37
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757